PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0110s0079.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family WRKY
Protein Properties Length: 604aa    MW: 65212.5 Da    PI: 7.6154
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0110s0079.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.25.2e-31343401259
                          --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                          +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed++++++tYeg+Hnh+
  Kalax.0110s0079.1.p 343 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDTTILITTYEGNHNHP 401
                          7*********************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.3E-33327403IPR003657WRKY domain
SuperFamilySSF1182907.72E-28335403IPR003657WRKY domain
PROSITE profilePS5081129.895337403IPR003657WRKY domain
SMARTSM007741.7E-37342402IPR003657WRKY domain
PfamPF031061.8E-26344401IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 604 aa     Download sequence    Send to blast
MDRGWGVTTV AEADRSVIPF FASKPSVINS FYSLKHSGGS SGSGMKIFPV SLSGSRERDM  60
PEGSGRRVVD EVDFFSGERE IMKAAAARDG ENSGVSVKEE VLHGEPILTK SDLNVNTRLD  120
LLTSNAGSDQ STVEDGRALD DKRTKTSQVS QMQLELGRLN AENQRLKEMF TQVSNNYQAL  180
QMHMIAFMQQ HQQQQLQAPV LESAQDHEMG GRKSEDKVVA APALPRQFLN LGPGSVSQEP  240
DELSNSSSGE RTHSGSQHNN NLEIASKRPR SDQENSRDGK GTDREDSPDS ETQGWSRNNK  300
AAKLGNNGNV VCEAKQVEQQ PTEATMRKAR VSVRARSEAP MISDGCQWRK YGQKMAKGNP  360
CPRAYYRCTM AVGCPVRKQV QRCAEDTTIL ITTYEGNHNH PLPPAAVAMA STTSAAASML  420
LSGSMSSTDG LMNPNFLARA ILPCSSNIAT ISASAPFPTV TLDLTHSPNP LQLQRQQRQQ  480
LQQQPSFAMP AANSLPQIFG PALYNQSRFS GLQLSQDSNL ASKGLPLPVP IPPPSLPQGQ  540
HTSFADTVSA ATAAITNDPN FTAVIAAAIS SFISANNQRP NSDSSNPNTK STPATTQQHH  600
NQQ*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A5e-23329405176WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007026134.10.0WRKY family transcription factor
SwissprotQ9XEC31e-142WRK42_ARATH; Probable WRKY transcription factor 42
TrEMBLA0A061GGS50.0A0A061GGS5_THECC; WRKY family transcription factor
STRINGVIT_10s0116g01200.t010.0(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.11e-120WRKY family protein